Transcript: ATP2A1-AS1:10

Basic information

LNCipedia transcript ID: ATP2A1-AS1:10 
LNCipedia gene ID: ATP2A1-AS1
Location (hg38): chr16:28878957-28879916
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 579 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260442.1|ENST00000561547.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -242.291 non-coding 
CPAT coding probability 6.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ATP2A1-AS1:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 ATP2A1-AS1:10
5.0 ATP2A1-AS1:10
5.1 ATP2A1-AS1:10
5.2 ATP2A1-AS1:10