Transcript: ATP2B1-AS1:13

Basic information

LNCipedia transcript ID: ATP2B1-AS1:13 
LNCipedia gene ID: ATP2B1-AS1
Location (hg38): chr12:89709790-89713726
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3937 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000271614.1|FTMT24800005151.1
Alternative gene names:

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.1111 non-coding 
CPAT coding probability 4.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ATP2B1-AS1:13 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00936:6
5.0 LINC00936:6
5.1 ATP2B1-AS1:7
5.2 ATP2B1-AS1:13