Transcript: ATP6V1B1-AS1:4

Basic information

LNCipedia transcript ID: ATP6V1B1-AS1:4 
HGNC Gene Symbol: ATP6V1B1-AS1    
HGNC Full Gene Name: ATP6V1B1 antisense RNA 1
Ensembl Gene ID: ENSG00000239322
Ensembl Transcript ID: ENST00000422761
Location (hg38): chr2:70941827-70948610
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1129 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000422761.1; AC007040.7-001; OTTHUMT00000332240.2; NONHSAT071519
Alternative gene names: ENSG00000239322.1; AC007040.7; OTTHUMG00000153727.2; ATP6V1B1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.1123 non-coding 
CPAT coding probability 7.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ATP6V1B1-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TEX261-1:2
4.0 ATP6V1B1-AS1:4
4.1 ATP6V1B1-AS1:4
5.0 ATP6V1B1-AS1:4
5.1 ATP6V1B1-AS1:4
5.2 ATP6V1B1-AS1:4