Transcript: BAALC-AS1:10

Basic information

LNCipedia transcript ID: BAALC-AS1:10 
HGNC Gene Symbol: BAALC-AS1    
HGNC Full Gene Name: BAALC antisense RNA 1
Ensembl Gene ID: ENSG00000247081
Ensembl Transcript ID: ENST00000519801
Location (hg38): chr8:103245778-103285907
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 977 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000519801; ENST00000519801.1; RP11-318M2.2-007; OTTHUMT00000380351.1; NONHSAT128170
Alternative gene names: ENSG00000247081; RP11-318M2.2; ENSG00000247081.2; OTTHUMG00000164798.3; ENSG00000247081.3; ENSG00000247081.7; BAALC-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.2179 non-coding 
CPAT coding probability 6.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BAALC-AS1:10 no no no no

Available literature

  1. Chen (2018), LncFZD6 initiates Wnt/β-catenin and liver TIC self-renewal through BRG1-mediated FZD6 transcriptional activation., Oncogene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C8orf56-1:3
3.1 lnc-C8orf56-1:4
4.0 BAALC-AS1:10
4.1 BAALC-AS1:10
5.0 BAALC-AS1:10
5.1 BAALC-AS1:10
5.2 BAALC-AS1:10