Transcript: BAALC-AS1:9

Basic information

LNCipedia transcript ID: BAALC-AS1:9 
HGNC Gene Symbol: BAALC-AS1    
HGNC Full Gene Name: BAALC antisense RNA 1
Ensembl Gene ID: ENSG00000247081
Ensembl Transcript ID: ENST00000523614
Location (hg38): chr8:103190964-103298382
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 582 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT128161; ENST00000523614.2; ENST00000523614.6
Alternative gene names: ENSG00000247081.3; RP11-318M2.2; ENSG00000247081.7; BAALC-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -350.219 non-coding 
CPAT coding probability 34.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BAALC-AS1:9 no no no no

Available literature

  1. Chen (2018), LncFZD6 initiates Wnt/β-catenin and liver TIC self-renewal through BRG1-mediated FZD6 transcriptional activation., Oncogene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C8orf56-1:14
4.0 BAALC-AS1:9
4.1 BAALC-AS1:9
5.0 BAALC-AS1:9
5.1 BAALC-AS1:9
5.2 BAALC-AS1:9