Transcript: BACH1-AS1:2

Basic information

LNCipedia transcript ID: BACH1-AS1:2 
HGNC Gene Symbol: BACH1-AS1    
HGNC Full Gene Name: BACH1 antisense RNA 1
Ensembl Gene ID: ENSG00000232118
Ensembl Transcript ID: ENST00000449923
Location (hg38): chr21:29370019-29371226
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 241 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00028912; ENST00000449923.1; BACH1-AS1-001; OTTHUMT00000182262.2; NONHSAT081641
Alternative gene names: XLOC_014048; linc-CCT8-2; ENSG00000232118.1; BACH1-AS1; OTTHUMG00000081874.2; ENSG00000232118.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -284.8671 non-coding 
CPAT coding probability 13.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BACH1-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GRIK1-1:1
3.1 lnc-GRIK1-1:1
4.0 BACH1-AS1:2
4.1 BACH1-AS1:2
5.0 BACH1-AS1:2
5.1 BACH1-AS1:2
5.2 BACH1-AS1:2