Transcript: BACH1-IT3:1

Basic information

LNCipedia transcript ID: BACH1-IT3:1 
HGNC Gene Symbol: BACH1-IT3    
HGNC Full Gene Name: BACH1 intronic transcript 3
Ensembl Gene ID: ENSG00000234293
Ensembl Transcript ID: ENST00000429843
Location (hg38): chr21:29496047-29500386
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 406 bp
Exons: 2
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00028831; ENST00000429843.1; BACH1-IT3-001; OTTHUMT00000171967.1; NONHSAT081646
Alternative gene names: XLOC_013906; linc-KRTAP13-1-4; ENSG00000234293.1; BACH1-IT3; OTTHUMG00000078874.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -305.6574 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BACH1-IT3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GRIK1-AS2-1:1
3.1 lnc-GRIK1-AS2-1:1
4.0 BACH1-IT3:1
4.1 BACH1-IT3:1
5.0 BACH1-IT3:1
5.1 BACH1-IT3:1
5.2 BACH1-IT3:1