Transcript: BAIAP2-DT:29

Basic information

LNCipedia transcript ID: BAIAP2-DT:29 
LNCipedia gene ID: BAIAP2-DT
Location (hg38): chr17:81029702-81031515
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1814 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000542745.1; CTD-2561B21.9-201; NONHSAT056427
Alternative gene names: ENSG00000226137.3; CTD-2561B21.9; OTTHUMG00000177697.1; BAIAP2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.8631 non-coding 
CPAT coding probability 48.33% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
BAIAP2-DT:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC127496.3-1:3
4.0 BAIAP2-AS1:10
4.1 BAIAP2-AS1:10
5.0 BAIAP2-AS1:10
5.1 BAIAP2-DT:15
5.2 BAIAP2-DT:29