Transcript: BCDIN3D-AS1:7

Basic information

LNCipedia transcript ID: BCDIN3D-AS1:7 
HGNC Gene Symbol: BCDIN3D-AS1    
HGNC Full Gene Name: BCDIN3D antisense RNA 1
Ensembl Gene ID: ENSG00000258057
Ensembl Transcript ID: ENST00000551146
Location (hg38): chr12:49828593-49832466
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 813 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000551146.1; RP11-70F11.6-002; OTTHUMT00000405532.1; NONHSAT028146; ENST00000551146.5
Alternative gene names: ENSG00000258057.1; RP11-70F11.6; OTTHUMG00000169706.2; BCDIN3D-AS1; ENSG00000258057.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.9116 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BCDIN3D-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMBIM6-1:4
4.0 BCDIN3D-AS1:7
4.1 BCDIN3D-AS1:7
5.0 BCDIN3D-AS1:7
5.1 BCDIN3D-AS1:7
5.2 BCDIN3D-AS1:7