Transcript: BDNF-AS:16
Basic information
LNCipedia transcript ID: BDNF-AS:16
LNCipedia gene ID: BDNF-AS
Location (hg38): chr11:27511045-27513835
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 943 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT018502
Alternative gene names: BT2A; BT2B; BT2C; BT2D; NCRNA00049; BDNF-AS1
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| BDNF-AS:16 | no | no | no | no |
Available literature
- Zhong (2017), Knockdown of long noncoding antisense RNA brain-derived neurotrophic factor attenuates hypoxia/reoxygenation-induced nerve cell apoptosis through the BDNF-TrkB-PI3K/Akt signaling pathway., Neuroreport
- Magistri (2015), Transcriptomics Profiling of Alzheimer's Disease Reveal Neurovascular Defects, Altered Amyloid-β Homeostasis, and Deregulated Expression of Long Noncoding RNAs., J. Alzheimers Dis.
- Pedram Fatemi (2015), Screening for Small-Molecule Modulators of Long Noncoding RNA-Protein Interactions Using AlphaScreen., J Biomol Screen
- Wang (2015), Genome-wide differential expression of synaptic long noncoding RNAs in autism spectrum disorder., Transl Psychiatry
- Kapusta (2013), Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs., PLoS Genet.
- Modarresi (2012), Inhibition of natural antisense transcripts in vivo results in gene-specific transcriptional upregulation., Nat. Biotechnol.
- Liu (2005), Human brain derived neurotrophic factor (BDNF) genes, splicing patterns, and assessments of associations with substance abuse and Parkinson's Disease., Am. J. Med. Genet. B Neuropsychiatr. Genet.
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 3.1 | lnc-METTL15-4:18 |
| 4.0 | BDNF-AS:16 |
| 4.1 | BDNF-AS:16 |
| 5.0 | BDNF-AS:16 |
| 5.1 | BDNF-AS:16 |
| 5.2 | BDNF-AS:16 |