Transcript: BICRA-AS1:3

Basic information

LNCipedia transcript ID: BICRA-AS1:3 
HGNC Gene Symbol: BICRA-AS1    
HGNC Full Gene Name: BICRA antisense RNA 1
Ensembl Gene ID: ENSG00000269806
Ensembl Transcript ID: ENST00000598376
Location (hg38): chr19:47615699-47626395
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 547 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066981; ENST00000598376.1
Alternative gene names: ENSG00000269806.1; CTD-3001H11.1; GLTSCR1-AS1; ; BICRA-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -166.5788 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BICRA-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF541-1:1
4.0 GLTSCR1-AS1:1
4.1 GLTSCR1-AS1:1
5.0 GLTSCR1-AS1:1
5.1 BICRA-AS1:2
5.2 BICRA-AS1:3