Transcript: BISPR:10

Basic information

LNCipedia transcript ID: BISPR:10 
LNCipedia gene ID: BISPR
Location (hg38): chr19:17405824-17414954
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1041 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: NONHSAT062879; ENST00000601885.1; ENST00000635176.1
Alternative gene names: ENSG00000269640.1; CTD-2521M24.9; ENSG00000282851.1; BISPR;

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.9251 non-coding 
CPAT coding probability 7.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BISPR:10 yes no no no

Available literature

  1. Zhang (2018), LncRNA BISPR promotes the progression of thyroid papillary carcinoma by regulating miR-21-5p., Int J Immunopathol Pharmacol
  2. Barriocanal (2014), Long Non-Coding RNA BST2/BISPR is Induced by IFN and Regulates the Expression of the Antiviral Factor Tetherin., Front Immunol

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM125A-1:10
4.0 BISPR:10
4.1 BISPR:10
5.0 BISPR:10
5.1 BISPR:10
5.2 BISPR:10