Transcript: BISPR:13

Basic information

LNCipedia transcript ID: BISPR:13 
LNCipedia gene ID: BISPR
Location (hg38): chr19:17406109-17420130
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 480 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT062881
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 66.41% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
BISPR:13 yes no no no

Available literature

  1. Zhang (2018), LncRNA BISPR promotes the progression of thyroid papillary carcinoma by regulating miR-21-5p., Int J Immunopathol Pharmacol
  2. Barriocanal (2014), Long Non-Coding RNA BST2/BISPR is Induced by IFN and Regulates the Expression of the Antiviral Factor Tetherin., Front Immunol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM125A-1:13
4.0 BISPR:13
4.1 BISPR:13
5.0 BISPR:13
5.1 BISPR:13
5.2 BISPR:13