Transcript: BISPR:17

Basic information

LNCipedia transcript ID: BISPR:17 
LNCipedia gene ID: BISPR
Location (hg38): chr19:17405703-17415164
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1496 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269640.1|ENST00000534306.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.6354 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BISPR:17 yes no no no

Available literature

  1. Zhang (2018), LncRNA BISPR promotes the progression of thyroid papillary carcinoma by regulating miR-21-5p., Int J Immunopathol Pharmacol
  2. Barriocanal (2014), Long Non-Coding RNA BST2/BISPR is Induced by IFN and Regulates the Expression of the Antiviral Factor Tetherin., Front Immunol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 BISPR:17
5.0 BISPR:17
5.1 BISPR:17
5.2 BISPR:17