Transcript: BISPR:38

Basic information

LNCipedia transcript ID: BISPR:38 
LNCipedia gene ID: BISPR
RefSeq ID: NR_130766
Location (hg38): chr19:17405686-17415736
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1861 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_130766.1
Alternative gene names: BISPR


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 11.3828 non-coding 
CPAT coding probability 6.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BISPR:38 yes no no no

Available literature

  1. Zhang (2018), LncRNA BISPR promotes the progression of thyroid papillary carcinoma by regulating miR-21-5p., Int J Immunopathol Pharmacol
  2. Barriocanal (2014), Long Non-Coding RNA BST2/BISPR is Induced by IFN and Regulates the Expression of the Antiviral Factor Tetherin., Front Immunol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 BISPR:38
5.1 BISPR:38
5.2 BISPR:38