Transcript: BMF-AS1:3

Basic information

LNCipedia transcript ID: BMF-AS1:3 
HGNC Gene Symbol: BMF-AS1    
HGNC Full Gene Name: BMF antisense RNA 1
Ensembl Gene ID: ENSG00000259409
Ensembl Transcript ID: ENST00000559022
Location (hg38): chr15:40088832-40089386
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 461 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000559022.1; RP11-521C20.3-001; OTTHUMT00000418282.1; NONHSAT041809
Alternative gene names: ENSG00000259409.1; RP11-521C20.3; OTTHUMG00000172394.1; AC021755.2; BMF-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -191.3883 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BMF-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EIF2AK4-3:1
4.0 lnc-EIF2AK4-3:1
4.1 lnc-EIF2AK4-3:1
5.0 lnc-EIF2AK4-3:1
5.1 BMF-AS1:2
5.2 BMF-AS1:3