Transcript: BOK-AS1:11

Basic information

LNCipedia transcript ID: BOK-AS1:11 
LNCipedia gene ID: BOK-AS1
Location (hg38): chr2:241543823-241553604
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1212 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234235.1|MICT00000211733.1
Alternative gene names: NCRNA00151; NAToB


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 17.7054 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BOK-AS1:11 yes no no no

Available literature

  1. Zhang (2009), A natural antisense transcript, BOKAS, regulates the pro-apoptotic activity of human Bok., Int. J. Oncol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 BOK-AS1:11
5.0 BOK-AS1:11
5.1 BOK-AS1:11
5.2 BOK-AS1:11