Transcript: BOK-AS1:13

Basic information

LNCipedia transcript ID: BOK-AS1:13 
LNCipedia gene ID: BOK-AS1
RefSeq ID: NR_033346
Location (hg38): chr2:241544384-241559143
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 828 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_033346.1
Alternative gene names: BOK-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.3321 non-coding 
CPAT coding probability 9.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BOK-AS1:13 yes no no no

Available literature

  1. Zhang (2009), A natural antisense transcript, BOKAS, regulates the pro-apoptotic activity of human Bok., Int. J. Oncol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 BOK-AS1:13
5.1 BOK-AS1:13
5.2 BOK-AS1:13