Transcript: BOK-AS1:3

Basic information

LNCipedia transcript ID: BOK-AS1:3 
HGNC Gene Symbol: BOK-AS1    
HGNC Full Gene Name: BOK antisense RNA 1
Ensembl Gene ID: ENSG00000234235
Ensembl Transcript ID: ENST00000434306
Location (hg38): chr2:241544403-241558977
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 643 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000434306.1; BOK-AS1-001; OTTHUMT00000323113.1
Alternative gene names: ENSG00000234235.1; BOK-AS1; OTTHUMG00000151556.1; NCRNA00151; NAToB


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.3321 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BOK-AS1:3 yes no no no

Available literature

  1. Zhang (2009), A natural antisense transcript, BOKAS, regulates the pro-apoptotic activity of human Bok., Int. J. Oncol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-THAP4-1:1
4.0 BOK-AS1:3
4.1 BOK-AS1:3
5.0 BOK-AS1:3
5.1 BOK-AS1:3
5.2 BOK-AS1:3