Transcript: BSN-DT:22

Basic information

LNCipedia transcript ID: BSN-DT:22 
LNCipedia gene ID: BSN-DT
Location (hg38): chr3:49549306-49554177
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2362 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005458; NONHSAT089705
Alternative gene names: XLOC_003118; linc-NICN1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.4755 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BSN-DT:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NICN1-1:3
3.1 lnc-NICN1-1:3
4.0 BSN-AS2:4
4.1 BSN-AS2:4
5.0 BSN-AS2:4
5.1 BSN-DT:11
5.2 BSN-DT:22