Transcript: C21orf91-OT1:1

Basic information

LNCipedia transcript ID: C21orf91-OT1:1 
HGNC Gene Symbol: C21orf91-OT1    
HGNC Full Gene Name: C21orf91 overlapping transcript 1
Ensembl Gene ID: ENSG00000240770
Ensembl Transcript ID: ENST00000430815
Location (hg38): chr21:17763315-17792523
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 717 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000430815.1; C21orf91-OT1-003; OTTHUMT00000158207.1; NONHSAT081291; ENST00000430815.5
Alternative gene names: ENSG00000240770.1; C21orf91-OT1; OTTHUMG00000074506.1; ENSG00000240770.5; D21S2089E


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -188.6284 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C21orf91-OT1:1 no no no no

Available literature

  1. Reymond (2002), Nineteen additional unpredicted transcripts from human chromosome 21., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C21orf91-1:1
4.0 C21orf91-OT1:1
4.1 C21orf91-OT1:1
5.0 C21orf91-OT1:1
5.1 C21orf91-OT1:1
5.2 C21orf91-OT1:1