Transcript: C21orf91-OT1:2

Basic information

LNCipedia transcript ID: C21orf91-OT1:2 
HGNC Gene Symbol: C21orf91-OT1    
HGNC Full Gene Name: C21orf91 overlapping transcript 1
Ensembl Gene ID: ENSG00000240770
Ensembl Transcript ID: ENST00000430401
RefSeq ID: NR_038870
Location (hg38): chr21:17777404-17792509
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 432 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000430401.1; C21orf91-OT1-001; OTTHUMT00000158205.1; NONHSAT081292; NR_038870; ENST00000430401.5; NR_038870.1
Alternative gene names: ENSG00000240770.1; C21orf91-OT1; OTTHUMG00000074506.1; ENSG00000240770.5; D21S2089E


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -107.9758 non-coding 
CPAT coding probability 0.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C21orf91-OT1:2 no no no no

Available literature

  1. Reymond (2002), Nineteen additional unpredicted transcripts from human chromosome 21., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C21orf91-1:2
4.0 C21orf91-OT1:2
4.1 C21orf91-OT1:2
5.0 C21orf91-OT1:2
5.1 C21orf91-OT1:2
5.2 C21orf91-OT1:2