Transcript: C8orf37-AS1:3

Basic information

LNCipedia transcript ID: C8orf37-AS1:3 
LNCipedia gene ID: C8orf37-AS1
RefSeq ID: NR_038209
Location (hg38): chr8:95268836-95810143
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 377 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT127829; NR_038209; NR_038209.1
Alternative gene names: tospeak; C8orf37-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -212.43 non-coding 
CPAT coding probability 3.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C8orf37-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLEKHF2-2:4
4.0 C8orf37-AS1:3
4.1 C8orf37-AS1:3
5.0 C8orf37-AS1:3
5.1 C8orf37-AS1:3
5.2 C8orf37-AS1:3