Transcript: C9orf135-DT:19

Basic information

LNCipedia transcript ID: C9orf135-DT:19 
LNCipedia gene ID: C9orf135-DT
Location (hg38): chr9:69819407-69820667
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 973 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00015603
Alternative gene names: XLOC_007727; linc-PTAR1-6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 32.2079 non-coding 
CPAT coding probability 8.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C9orf135-DT:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PTAR1-2:4
3.1 lnc-PTAR1-2:4
4.0 C9orf135-AS1:5
4.1 C9orf135-AS1:5
5.0 C9orf135-AS1:5
5.1 C9orf135-DT:10
5.2 C9orf135-DT:19