Transcript: CALML3-AS1:11

Basic information

LNCipedia transcript ID: CALML3-AS1:11 
LNCipedia gene ID: CALML3-AS1
Location (hg38): chr10:5538481-5554318
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 15544 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000205488.4|MICT00000036371.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.6492 non-coding 
CPAT coding probability 31.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CALML3-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CALML3-AS1:11
5.0 CALML3-AS1:11
5.1 CALML3-AS1:11
5.2 CALML3-AS1:11