Transcript: CAMTA1-DT:8

Basic information

LNCipedia transcript ID: CAMTA1-DT:8 
LNCipedia gene ID: CAMTA1-DT
Location (hg38): chr1:6783715-6784982
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1268 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237436.1|MICT00000002343.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -107.1138 non-coding 
CPAT coding probability 3.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CAMTA1-DT:8 no no no no

Available literature

  1. Ding (2016), Long Noncoding RNA lncCAMTA1 Promotes Proliferation and Cancer Stem Cell-Like Properties of Liver Cancer by Inhibiting CAMTA1., Int J Mol Sci


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DNAJC11-1:3
5.0 lnc-DNAJC11-1:3
5.1 CAMTA1-DT:3
5.2 CAMTA1-DT:8