Transcript: CASC11:1
Basic information
LNCipedia transcript ID: CASC11:1
HGNC Gene Symbol: CASC11
HGNC Full Gene Name:
cancer susceptibility 11
Ensembl Gene ID:
ENSG00000249375
Ensembl Transcript ID:
ENST00000519071
RefSeq ID:
NR_117102
Location (hg38): chr8:127700608-127733967
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 791 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000519071; ENST00000519071.1; RP11-1136L8.1-003; OTTHUMT00000380688.1; NONHSAT129041; NR_117102; ENST00000519071.5; NR_117102.1
Alternative gene names: ENSG00000249375; RP11-1136L8.1; ENSG00000249375.2; OTTHUMG00000164870.1; ENSG00000249375.3; CASC11; ENSG00000249375.7; TCONS_00014535; LINC00990; CARLo-7; ENST00000518376
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| CASC11:1 | no | no | no | no |
Available literature
- Yin (2017), Identification of long noncoding RNA expression profile in oxaliplatin-resistant hepatocellular carcinoma cells., Gene
- Kim (2014), Long-range interaction and correlation between MYC enhancer and oncogenic long noncoding RNA CARLo-5., Proc. Natl. Acad. Sci. U.S.A.
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 1.3 | lnc-TMEM75-1:1 |
| 3.1 | lnc-TMEM75-1:1 |
| 4.0 | CASC11:1 |
| 4.1 | CASC11:1 |
| 5.0 | CASC11:1 |
| 5.1 | CASC11:1 |
| 5.2 | CASC11:1 |