Transcript: CASC6:1

Basic information

LNCipedia transcript ID: CASC6:1 
LNCipedia gene ID: CASC6
Location (hg38): chr6:91686636-91747149
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 733 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT113995
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.4118 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CASC6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAP3K7-2:3
4.0 CASC6:1
4.1 CASC6:1
5.0 CASC6:1
5.1 CASC6:1
5.2 CASC6:1