Transcript: CATIP-AS1:10

Basic information

LNCipedia transcript ID: CATIP-AS1:10 
LNCipedia gene ID: CATIP-AS1
Location (hg38): chr2:218368748-218368986
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 239 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225062.1|FTMT20600013628.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -237.9964 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CATIP-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CATIP-AS1:10
5.0 CATIP-AS1:10
5.1 CATIP-AS1:10
5.2 CATIP-AS1:10