Transcript: CATIP-AS1:13

Basic information

LNCipedia transcript ID: CATIP-AS1:13 
LNCipedia gene ID: CATIP-AS1
Location (hg38): chr2:218366665-218367853
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 557 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225062.1|MICT00000207660.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 53.7558 non-coding 
CPAT coding probability 3.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
CATIP-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CATIP-AS1:13
5.0 CATIP-AS1:13
5.1 CATIP-AS1:13
5.2 CATIP-AS1:13