Transcript: CATIP-AS1:4

Basic information

LNCipedia transcript ID: CATIP-AS1:4 
HGNC Gene Symbol: CATIP-AS1    
HGNC Full Gene Name: CATIP antisense RNA 1
Ensembl Gene ID: ENSG00000225062
Ensembl Transcript ID: ENST00000425481
Location (hg38): chr2:218366666-218367322
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 529 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425481.1; AC021016.6-002; OTTHUMT00000338335.1; NONHSAT076911
Alternative gene names: ENSG00000225062.1; AC021016.6; OTTHUMG00000155067.1; CATIP-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -185.4424 non-coding 
CPAT coding probability 6.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CATIP-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMBIM1-2:2
4.0 CATIP-AS1:4
4.1 CATIP-AS1:4
5.0 CATIP-AS1:4
5.1 CATIP-AS1:4
5.2 CATIP-AS1:4