Transcript: CCDC144NL-AS1:27

Basic information

LNCipedia transcript ID: CCDC144NL-AS1:27 
LNCipedia gene ID: CCDC144NL-AS1
Location (hg38): chr17:20956682-20958404
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 246 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT146867
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.1702 non-coding 
CPAT coding probability 2.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CCDC144NL-AS1:27 no no no no

Available literature

  1. Guo (2017), Expression profiles analysis reveals an integrated miRNA-lncRNA signature to predict survival in ovarian cancer patients with wild-type BRCA1/2., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DHRS7B-5:25
4.0 CCDC144NL-AS1:27
4.1 CCDC144NL-AS1:27
5.0 CCDC144NL-AS1:27
5.1 CCDC144NL-AS1:27
5.2 CCDC144NL-AS1:27