Transcript: CCEPR:7

Basic information

LNCipedia transcript ID: CCEPR:7 
LNCipedia gene ID: CCEPR
Location (hg38): chr10:59173404-59176449
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3046 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000118225.1|FTMT23800003630.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -20.1215 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CCEPR:7 no no no no

Available literature

  1. Yang (2015), Long noncoding RNA CCHE1 promotes cervical cancer cell proliferation via upregulating PCNA., Tumour Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM13C-2:3
5.0 lnc-FAM13C-2:3
5.1 CCEPR:4
5.2 CCEPR:7