Transcript: CCND2-AS1:8

Basic information

LNCipedia transcript ID: CCND2-AS1:8 
LNCipedia gene ID: CCND2-AS1
Ensembl Gene ID: ENSG00000255920
Ensembl Transcript ID: ENST00000537370
Location (hg38): chr12:4252735-4275065
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 495 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000537370.1; RP11-264F23.4-001; OTTHUMT00000399291.1; NONHSAT025948
Alternative gene names: ENSG00000255920.1; RP11-264F23.4; OTTHUMG00000168320.1; CCND2-AS2; ; ENSG00000255920.2; CCND2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.8558 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CCND2-AS1:8 yes no no no

Available literature

  1. Zhang (2017), Highly expressed lncRNA CCND2-AS1 promotes glioma cell proliferation through Wnt/β-catenin signaling., Biochem. Biophys. Res. Commun.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FGF23-1:1
4.0 CCND2-AS2:1
4.1 CCND2-AS2:1
5.0 CCND2-AS2:1
5.1 CCND2-AS1:6
5.2 CCND2-AS1:8