Transcript: CCNT2-AS1:10

Basic information

LNCipedia transcript ID: CCNT2-AS1:10 
LNCipedia gene ID: CCNT2-AS1
RefSeq ID: NR_036549
Location (hg38): chr2:134866633-134918606
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1405 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT074577; NR_036549; NR_036549.1
Alternative gene names: ; CCNT2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -207.1618 non-coding 
CPAT coding probability 5.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CCNT2-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-YSK4-1:8
4.0 CCNT2-AS1:10
4.1 CCNT2-AS1:10
5.0 CCNT2-AS1:10
5.1 CCNT2-AS1:10
5.2 CCNT2-AS1:10