Transcript: CCNT2-AS1:17

Basic information

LNCipedia transcript ID: CCNT2-AS1:17 
LNCipedia gene ID: CCNT2-AS1
Location (hg38): chr2:134864716-134918658
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3218 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224043.3|FTMT20500008087.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -95.7451 non-coding 
CPAT coding probability 2.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CCNT2-AS1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CCNT2-AS1:17
5.0 CCNT2-AS1:17
5.1 CCNT2-AS1:17
5.2 CCNT2-AS1:17