Transcript: CCNT2-AS1:20

Basic information

LNCipedia transcript ID: CCNT2-AS1:20 
LNCipedia gene ID: CCNT2-AS1
Location (hg38): chr2:134867318-134918658
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 616 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224043.3|ENST00000413962.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -243.2706 non-coding 
CPAT coding probability 3.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CCNT2-AS1:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CCNT2-AS1:20
5.0 CCNT2-AS1:20
5.1 CCNT2-AS1:20
5.2 CCNT2-AS1:20