Transcript: CCNT2-AS1:7

Basic information

LNCipedia transcript ID: CCNT2-AS1:7 
HGNC Gene Symbol: CCNT2-AS1    
HGNC Full Gene Name: CCNT2 antisense RNA 1
Ensembl Gene ID: ENSG00000224043
Ensembl Transcript ID: ENST00000413962
Location (hg38): chr2:134867318-134918678
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 636 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000413962.1; AC016725.4-002; OTTHUMT00000337382.1; NONHSAT074578; ENST00000413962.5
Alternative gene names: ENSG00000224043.3; AC016725.4; OTTHUMG00000154855.2; CCNT2-AS1; ENSG00000224043.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -243.2706 non-coding 
CPAT coding probability 5.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CCNT2-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-YSK4-1:2
4.0 CCNT2-AS1:7
4.1 CCNT2-AS1:7
5.0 CCNT2-AS1:7
5.1 CCNT2-AS1:7
5.2 CCNT2-AS1:7