Transcript: CD81-AS1:1

Basic information

LNCipedia transcript ID: CD81-AS1:1 
HGNC Gene Symbol: CD81-AS1    
HGNC Full Gene Name: CD81 antisense RNA 1
Ensembl Gene ID: ENSG00000238184
Ensembl Transcript ID: ENST00000413483
Location (hg38): chr11:2328749-2377992
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1460 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000413483.1; AC129929.5-002; OTTHUMT00000143277.1; NONHSAT017507
Alternative gene names: ENSG00000238184.1; AC129929.5; OTTHUMG00000009760.2; CD81-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.8502 non-coding 
CPAT coding probability 5.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CD81-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf21-1:1
4.0 CD81-AS1:1
4.1 CD81-AS1:1
5.0 CD81-AS1:1
5.1 CD81-AS1:1
5.2 CD81-AS1:1