Transcript: CD81-AS1:2

Basic information

LNCipedia transcript ID: CD81-AS1:2 
LNCipedia gene ID: CD81-AS1
RefSeq ID: NR_108080
Location (hg38): chr11:2328749-2377992
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1174 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_108080; NR_108080.1
Alternative gene names: ; CD81-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.8502 non-coding 
CPAT coding probability 5.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CD81-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf21-1:4
4.0 CD81-AS1:2
4.1 CD81-AS1:2
5.0 CD81-AS1:2
5.1 CD81-AS1:2
5.2 CD81-AS1:2