Transcript: CDKN2A-DT:4

Basic information

LNCipedia transcript ID: CDKN2A-DT:4 
HGNC Gene Symbol: CDKN2A-DT    
HGNC Full Gene Name: CDKN2A divergent transcript
Ensembl Gene ID: ENSG00000224854
Ensembl Transcript ID: ENST00000441769
Location (hg38): chr9:21966929-21967751
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 823 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000441769.3
Alternative gene names: ENSG00000224854.3; CDKN2A-AS1; bA149I2.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -78.6431 non-coding 
CPAT coding probability 10.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CDKN2A-DT:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 CDKN2A-AS1:1
4.1 CDKN2A-AS1:1
5.0 CDKN2A-AS1:1
5.1 CDKN2A-DT:2
5.2 CDKN2A-DT:4