Transcript: CELF2-AS1:4

Basic information

LNCipedia transcript ID: CELF2-AS1:4 
LNCipedia gene ID: CELF2-AS1
Location (hg38): chr10:11312769-11344786
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6651 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000181800.5|MICT00000037138.1
Alternative gene names: FLJ40494; Em:AC026887.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
VSMEIFSVK 92.3076923076923% antisense-3
Lee translation initiation sites non-coding 
PhyloCSF score 80.6375 coding 
CPAT coding probability 21.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
CELF2-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CELF2-AS1:4
5.0 CELF2-AS1:4
5.1 CELF2-AS1:4
5.2 CELF2-AS1:4