Transcript: CEP83-DT:9

Basic information

LNCipedia transcript ID: CEP83-DT:9 
HGNC Gene Symbol: CEP83-DT    
HGNC Full Gene Name: CEP83 divergent transcript
Ensembl Gene ID: ENSG00000278916
Ensembl Transcript ID: ENST00000623122
Location (hg38): chr12:94460003-94462484
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2482 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623122.1
Alternative gene names: ENSG00000278916.1; CEP83-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -40.9854 non-coding 
CPAT coding probability 28.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CEP83-DT:9 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 CEP83-AS1:2
4.1 CEP83-AS1:2
5.0 CEP83-AS1:2
5.1 CEP83-DT:3
5.2 CEP83-DT:9