Transcript: CHRM3-AS1:2

Basic information

LNCipedia transcript ID: CHRM3-AS1:2 
LNCipedia gene ID: CHRM3-AS1
RefSeq ID: NR_046582
Location (hg38): chr1:239898019-239899872
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 483 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046582; NR_046582.1
Alternative gene names: ; CHRM3-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -90.3132 non-coding 
CPAT coding probability 11.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CHRM3-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GREM2-5:2
4.0 CHRM3-AS1:2
4.1 CHRM3-AS1:2
5.0 CHRM3-AS1:2
5.1 CHRM3-AS1:2
5.2 CHRM3-AS1:2