Transcript: CLIP1-AS1:2

Basic information

LNCipedia transcript ID: CLIP1-AS1:2 
LNCipedia gene ID: CLIP1-AS1
RefSeq ID: NR_045382
Location (hg38): chr12:122395542-122399944
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 896 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_045382; NR_045382.1
Alternative gene names: ; CLIP1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -264.8439 non-coding 
CPAT coding probability 15.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CLIP1-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KNTC1-1:3
4.0 CLIP1-AS1:2
4.1 CLIP1-AS1:2
5.0 CLIP1-AS1:2
5.1 CLIP1-AS1:2
5.2 CLIP1-AS1:2