Transcript: CNNM3-DT:19

Basic information

LNCipedia transcript ID: CNNM3-DT:19 
LNCipedia gene ID: CNNM3-DT
Location (hg38): chr2:96814872-96816042
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1171 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000049364.1|FTMT20600006207.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -170.3514 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CNNM3-DT:19 no no no no

Available literature

  1. Lu (2016), Increased expression of long noncoding RNAs LOC100652951 and LOC100506036 in T cells from patients with rheumatoid arthritis facilitates the inflammatory responses., Immunol. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ANKRD23-2:8
5.0 lnc-ANKRD23-2:8
5.1 CNNM3-DT:9
5.2 CNNM3-DT:19