Transcript: CNTFR-AS1:1

Basic information

LNCipedia transcript ID: CNTFR-AS1:1 
LNCipedia gene ID: CNTFR-AS1
Location (hg38): chr9:34558012-34573074
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1320 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003zur_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.8531 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CNTFR-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAI1-2:5
4.0 CNTFR-AS1:1
4.1 CNTFR-AS1:1
5.0 CNTFR-AS1:1
5.1 CNTFR-AS1:1
5.2 CNTFR-AS1:1