Transcript: COX10-AS1:11

Basic information

LNCipedia transcript ID: COX10-AS1:11 
HGNC Gene Symbol: COX10-AS1    
HGNC Full Gene Name: COX10 antisense RNA 1
Ensembl Gene ID: ENSG00000236088
Ensembl Transcript ID: ENST00000577798
Location (hg38): chr17:13776832-13892839
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 936 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577798.2; ENST00000577798.6
Alternative gene names: ENSG00000236088.5; COX10-AS1; ENSG00000236088.9;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.9703 non-coding 
CPAT coding probability 2.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
COX10-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDRT15-2:9
4.0 COX10-AS1:11
4.1 COX10-AS1:11
5.0 COX10-AS1:11
5.1 COX10-AS1:11
5.2 COX10-AS1:11