Transcript: COX10-AS1:14

Basic information

LNCipedia transcript ID: COX10-AS1:14 
HGNC Gene Symbol: COX10-AS1    
HGNC Full Gene Name: COX10 antisense RNA 1
Ensembl Gene ID: ENSG00000236088
Ensembl Transcript ID: ENST00000423323
Location (hg38): chr17:13776632-13792550
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3000 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000423323.2
Alternative gene names: ENSG00000236088.9; COX10-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -90.6826 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
COX10-AS1:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 COX10-AS1:14
4.1 COX10-AS1:14
5.0 COX10-AS1:14
5.1 COX10-AS1:14
5.2 COX10-AS1:14