Transcript: COX10-AS1:7

Basic information

LNCipedia transcript ID: COX10-AS1:7 
HGNC Gene Symbol: COX10-AS1    
HGNC Full Gene Name: COX10 antisense RNA 1
Ensembl Gene ID: ENSG00000236088
Ensembl Transcript ID: ENST00000623598
Location (hg38): chr17:14028741-14030657
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1917 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT145751; ENST00000623598.1
Alternative gene names: ENSG00000236088.9; COX10-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.409 non-coding 
CPAT coding probability 9.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
COX10-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDRT15-2:6
4.0 COX10-AS1:7
4.1 COX10-AS1:7
5.0 COX10-AS1:7
5.1 COX10-AS1:7
5.2 COX10-AS1:7